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 Dr. Atif Hasan Rahman (আতিফ হাসান রহমান)


Associate Professor

  •  Contact:

    • Department of Computer Science and Engineering
    Bangladesh University of Engineering and Technology
    Dhaka-1000, Bangladesh

  •  Telephone:

    • Office:
    Cell:
    Residence:

  •  Email: atif AT cse DOT buet DOT ac DOT bd

  •  Homepage:

  •  Research Area:

    • Bioinformatics and Computational Biology

  •  Research Interest:

    • Genomics

  •  Academic Background:

    • Ph.D. in Computer Science, 2015
    University of California, Berkeley

    B.Sc.Engg. in Computer Science and Engineering, 2007
    Bangladesh University of Engineering and Technology

  •  Selected Publications:

    • Tasfia Zahin, Md. Hasin Abrar, Mizanur Rahman, Tahrina Tasnim, Md. Shamsuzzoha Bayzid and Atif Rahman, An Alignment-free Method for Phylogeny Estimation using Maximum Likelihood. bioRxiv (2019): 875526.

    Mahmudur Rahman Hera, Amatur Rahman and Atif Rahman, kRISP-meR: A Reference-free Guide-RNA Design Tool for CRISPR/Cas9. bioRxiv (2019): 869115.

    Atif Rahman and Lior Pachter, SWALO: scaffolding with assembly likelihood optimization. bioRxiv (2016): 081786.

    Atif Rahman, Ingilief Hallgrimsdottir, Michael B. Eisen and Lior Pachter, Association mapping from sequencing reads using k-mers. eLife 7 (2018): e32920.

    Atif Rahman and Lior Pachter, CGAL: computing genome assembly likelihoods, Genome Biology, 14 (2013), R8.

    Atif Rahman, Swakkhar Shatabda, and Masud Hasan. An approximation algorithm for sorting by reversals and transpositions. Journal of Discrete Algorithms, 6(3):449–457, Elsevier, 2008.

  •  Journal Papers:

    • 3. Atif Hasan Rahman, Ingilief Hallgrimsdottir, Michael Eisen, and Lior Pachter, Association mapping from sequencing reads using k-mers. eLife, 7(e32920), 2018
    2. Atif Hasan Rahman, and Lior Pachter, CGAL: computing genome assembly likelihoods. Genome Biology, 14(R8), 2013
    1. Atif Hasan Rahman, Swakkhar Shatabda, and Masud Hasan, An approximation algorithm for sorting by reversals and transpositions. Journal of Discrete Algorithms, Elsevier, 6(3), :449-457, 2008

  •  Conference Papers:

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    Department of Computer Science and Engineering, ECE building, Palashi, Dhaka, Bangladesh. The Department is part of the Faculty of Electrical and Electronic Engineering at the Bangladesh University of Engineering & Technology. No part or content of this website may be copied or reproduced without permission of the department authority. Contact info@grad.cse.buet.ac.bd with questions or comments on this page.  [Development Credits]