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Contact:
Department of Computer Science and Engineering
Bangladesh University of Engineering and Technology
Dhaka-1000, Bangladesh

Email:
atif DOT bd AT gmail DOT com

Telephone:
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Dr. Atif Hasan Rahman (আতিফ হাসান রহমান)

Assistant Professor
Research Area:
Bioinformatics and Computational Biology

Research Interest:
Genomics
Academic Background:
Ph.D. in Computer Science, 2015
University of California, Berkeley

B.Sc.Engg. in Computer Science and Engineering, 2007
Bangladesh University of Engineering and Technology

Selected Publications:

Atif Rahman and Lior Pachter, SWALO: scaffolding with assembly likelihood optimization. bioRxiv (2016): 081786.

Atif Rahman, Ingilief Hallgrimsdottir, Michael B. Eisen and Lior Pachter, Association mapping from sequencing reads using k-mers. eLife 7 (2018): e32920.

Atif Rahman and Lior Pachter, CGAL: computing genome assembly likelihoods, Genome Biology, 14 (2013), R8.

Atif Rahman, Swakkhar Shatabda, and Masud Hasan. An approximation algorithm for sorting by reversals and transpositions. Journal of Discrete Algorithms, 6(3):449–457, Elsevier, 2008.

Journal Papers:

1. A. H. Rahman, Ingilief Hallgrimsdottir, Michael Eisen, Lior Pachter, Association mapping from sequencing reads using k-mers, eLife, 7(e32920), , 2018.
2. A. H. Rahman, Lior Pachter, CGAL: computing genome assembly likelihoods, Genome Biology, 14(R8), , 2013.
3. A. H. Rahman, Swakkhar Shatabda, Masud Hasan, An approximation algorithm for sorting by reversals and transpositions, Journal of Discrete Algorithms, 6(3), 449-457, 2008.
Conference Papers: